Publications | Genome Modality

Cell Chemical Biology, DOI: https://doi.org/10.1016/j.chembiol.2021.08.003

Targeted elimination of mutated mitochondrial DNA by a multi-functional conjugate capable of sequence-specific adenine alkylation

Takuya Hidaka, Kaori Hashiya, Toshikazu Bando, Ganesh N. Pandian, and Hiroshi Sugiyama
eLife. 2021; 10: e71585.

Genome Organization: The loopy world of cohesin

Kazuhiro Maeshima, Shiori Iida
Curr Opin Struct Biol . 2021 Jul 22;71:123-135. doi: 10.1016/j.sbi.2021.06.004.

Liquid-like chromatin in the cell: What can we learn from imaging and computational modeling?

Yuji Itoh, Esmae J. Woods, Katsuhiko Minami, Kazuhiro Maeshima, Rosana Collepardo-Guevara
Science . 2021 May 28;372(6545):984-989. doi: 10.1126/science.abe2218.

3D genomics across the tree of life reveals condensin II as a determinant of architecture type

Claire Hoencamp, Olga Dudchenko, Ahmed M. O. Elbatsh, Sumitabha Brahmachari, Jonne A. Raaijmakers, Tom van Schaik, Ángela Sedeño Cacciatore, Vinícius G. Contessoto, Roy G. H. P. van Heesbeen, Bram van den Broek, Aditya N. Mhaskar, Hans Teunissen, Brian Glenn St Hilaire, David Weisz, Arina D. Omer, Melanie Pham, Zane Colaric, Zhenzhen Yang, Suhas S. P. Rao, Namita Mitra, Christopher Lui, Weijie Yao, Ruqayya Khan, Leonid L. Moroz, Andrea Kohn, Judy St. Leger, Alexandria Mena, Karen Holcroft, Maria Cristina Gambetta, Fabian Lim, Emma Farley, Nils Stein, Alexander Haddad, Daniel Chauss, Ayse Sena Mutlu, Meng C. Wang, Neil D. Young, Evin Hildebrandt, Hans H. Cheng, Christopher J. Knight, Theresa L. U. Burnham, Kevin A. Hovel, Andrew J. Beel, Pierre-Jean Mattei, Roger D. Kornberg, Wesley C. Warren, Gregory Cary, José Luis Gómez-Skarmeta, Veronica Hinman, Kerstin Lindblad-Toh, Federica Di Palma, Kazuhiro Maeshima, Asha S. Multani, Sen Pathak, Liesl Nel-Themaa, Richard R. Behringer, Parwinder Kaur, René H. Medema, Bas van Steensel, Elzo de Wit, José N. Onuchic, Michele Di Pierro, Erez Lieberman Aiden, Benjamin D. Rowland
Nature Communications 2021 May 18; 12, Article number: 2917. doi: 10.1038/s41467-021-23205-w

Guiding functions of the C-terminal domain of topoisomerase IIα advance mitotic chromosome assembly

Keishi Shintomi, Tatsuya Hirano
Cell Rep . 2021 Apr 27;35(4):108999. doi: 10.1016/j.celrep.2021.108999.

Opening of cohesin’s SMC ring is essential for timely DNA replication and DNA loop formation

Ryota Sakata, Kyoma Niwa, Diego Ugarte La Torre, Eri Tahara, Shoji Takada, Tomoko Nishiyama
Nucleic Acids Res . 2021 Apr 22;gkab275. doi: 10.1093/nar/gkab275.

Slow chromatin dynamics enhances promoter accessibility to transcriptional condensates

Tetsuya Yamamoto, Takahiro Sakaue, Helmut Schiessel
EMBO J . 2021 Apr 22;e107270. doi: 10.15252/embj.2020107270.

Paraspeckles are constructed as block copolymer micelles

Tomohiro Yamazaki, Tetsuya Yamamoto, Hyura Yoshino, Sylvie Souquere, Shinichi Nakagawa, Gerard Pierron, Tetsuro Hirose
Mol Cell. 2021 Apr 15;81(8):1579-1585. doi: 10.1016/j.molcel.2021.03.046.

Is transcriptional regulation just going through a phase?

Geeta J Narlikar, Sua Myong, Daniel Larson, Kazuhiro Maeshima, Nicole Francis, Karsten Rippe, Benjamin Sabari, Lucia Strader, Robert Tjian
Cold Spring Harb Perspect Biol . 2021 Apr 5;a040675. doi: 10.1101/cshperspect.a040675.

Physical Nature of Chromatin in the Nucleus

Kazuhiro Maeshima, Shiori Iida and Sachiko Tamura